The detailed information of tRNA gene sequence


Sequence ID>ENV09000144
Genome IDABSN01017880
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 624
End posion on genome 538
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aactgcttat
tRNA gene sequence 
GCCCAGATGGCGAAATTGGTAGACGCGCTAGTTTCAGGGACTAGTGTCAGCAATGATGTG
CAGGTTCGAGTCCTGTTCTGGGCACCA
Downstream region at tRNA end position 
tcggttaacc
Secondary structure (Cloverleaf model)
>ENV09000144	Leu	CAG
                   t      ACCA tcggttaacc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       A G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCAGCAATGATGT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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