The detailed information of tRNA gene sequence


Sequence ID>ENV09000160
Genome IDABSN01020439
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 77
End posion on genome 152
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acaaataggt
tRNA gene sequence 
AGGGGTATAGTGTTAGCGGCTAGCACGGCGGTCTCCAAAACCGTAAGGCCGGGTTCGAAT
CCTGGTACCCCTGCCA
Downstream region at tRNA end position 
catcgttacg
Secondary structure (Cloverleaf model)
>ENV09000160	Trp	CCA
                   t      GCCA catcgttacg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     G G T C C     A
      G A T        A      | | + | |     G
    C       T G T G       C C G G G     C
    G       + | | |                 T T
    G       G C A C
      C T A        G     AAGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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