The detailed information of tRNA gene sequence


Sequence ID>ENV09000216
Genome IDABSN01031828
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 550
End posion on genome 478
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cccgcgtccc
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGGAGAGCACTGCCTTTGCAAGGCAGGGGTTAGCGGTTCGAGC
CCGCTCAGGTCCAttc
Downstream region at tRNA end position 
ccgcaggggt
Secondary structure (Cloverleaf model)
>ENV09000216	Ala	TGC
                   c      Attc ccgcaggggt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          C G
                    T     T C G C C     A
      T A A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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