The detailed information of tRNA gene sequence


Sequence ID>ENV09000221
Genome IDABSN01033722
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 342
End posion on genome 252
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaatttcac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTAAGGCGCAGCACTGGAAATGCTGTGTGCTCCTAAAGGGC
ACCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
attcaacaaa
Secondary structure (Cloverleaf model)
>ENV09000221	Ser	GGA
                   c      GCCA attcaacaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTGCTCCTAAAGGGCACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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