The detailed information of tRNA gene sequence


Sequence ID>ENV09000222
Genome IDABSN01033771
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 769
End posion on genome 693
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgtacgactc
tRNA gene sequence 
GGGCGCATAGCTCAGCTGGTTAGAGCGCGTGCTTCACACGCACGAGGTCGGGGGTTCGAG
TCCCTCTGCGCCCACCA
Downstream region at tRNA end position 
tcctgcctgc
Secondary structure (Cloverleaf model)
>ENV09000222	Val	CAC
                   c      ACCA tcctgcctgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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