The detailed information of tRNA gene sequence


Sequence ID>ENV09000242
Genome IDABSN01036310
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 302
End posion on genome 375
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aagtttcaag
tRNA gene sequence 
GGACGTGTAGTTCAATGGTAGAACAGGGGCCTTTTAACCCCCTAACGAAAGTTCGATTCT
TTCCACGTTCACCA
Downstream region at tRNA end position 
cgtctttagt
Secondary structure (Cloverleaf model)
>ENV09000242	Lys	TTT
                   g      ACCA cgtctttagt
                     G - C
                     G + T
                     A - T
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     C T T T C     A
        A A        A      | | | | |     G
      T     C T T G       G A A A G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     TAAC
                    G - C
                    G - C
                    G - C
                    G - C
                    C   C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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