The detailed information of tRNA gene sequence


Sequence ID>ENV09000254
Genome IDABSN01038651
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 287
End posion on genome 204
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttgccgcctc
tRNA gene sequence 
GCCGAAGTGGTGGAACTGGTAGACGCGCTGCGTTCAGGGCGCAGTGGGCGCAAGCCCGTG
GGGGTTCGAGTCCCCCCTTCGGCAttg
Downstream region at tRNA end position 
gcagttcccg
Secondary structure (Cloverleaf model)
>ENV09000254	Leu	CAG
                   c      Attg gcagttcccg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C C C C C     A
      C A A        G      | | | | |     G
    T       G G T G       G G G G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TGGGCGCAAGCCCGT
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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