The detailed information of tRNA gene sequence


Sequence ID>ENV09000274
Genome IDABSN01042428
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 49
End posion on genome 138
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccggcggtgc
tRNA gene sequence 
GGACAGGTGTCCGAGTGGTTTAAGGAGCACGGTTGGAAGCCGTGTGTAGCCGAAAGGTTA
CCGTGGGTTCAAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
ctctttttcg
Secondary structure (Cloverleaf model)
>ENV09000274	Ser	GGA
                   c      GCCA ctctttttcg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGTAGCCGAAAGGTTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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