The detailed information of tRNA gene sequence


Sequence ID>ENV09000275
Genome IDABSN01042428
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 184
End posion on genome 273
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggccgctcgc
tRNA gene sequence 
GGTGAGGTGCTGGAGTGGTTGATCAGGCCGGTCTCGAAAACCGGTGTAGCCGAAAGGTTA
CCGTGGGTTCAAATCCCACCCTCACCGCCA
Downstream region at tRNA end position 
tcgactgaaa
Secondary structure (Cloverleaf model)
>ENV09000275	Ser	CGA
                   c      GCCA tcgactgaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    T       T C A G
      T G A        G     TGTAGCCGAAAGGTTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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