The detailed information of tRNA gene sequence


Sequence ID>ENV09000284
Genome IDABSN01044332
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 174
End posion on genome 83
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatacagtct
tRNA gene sequence 
GGAGGGGTGGCAGAGCCTGGTTGAACGCGCATGACTCGAAATCATGTGTATCCGCAAGGG
TACCGTGGGTTCAAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
tgcatagaga
Secondary structure (Cloverleaf model)
>ENV09000284	Ser	CGA
                   t      GCCA tgcatagaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  T         G A C G       G T G G G     C
  G             | |                 T T
  G         A C G C
    T T G A        G     TGTATCCGCAAGGGTACC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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