The detailed information of tRNA gene sequence


Sequence ID>ENV09000313
Genome IDABSN01049527
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 437
End posion on genome 511
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctgctttcaa
tRNA gene sequence 
GACCCCATCGTCTAGCCTGGTTAGGACACAAGCTTTTCAAGCTTGCGGCGCGGGTTCAAA
TCCCGCTGGGGTCACtt
Downstream region at tRNA end position 
gatcttttga
Secondary structure (Cloverleaf model)
>ENV09000313	Glu	TTC
                   a      ACtt gatcttttga
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       G C G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          A     CGGC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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