The detailed information of tRNA gene sequence


Sequence ID>ENV09000332
Genome IDABSN01053497
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 589
End posion on genome 664
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagatcctat
tRNA gene sequence 
GGGGCCGTGGCAGAAAGGCGTATGCACTTCCCTGTCGAGGAAGACGATGACGGTTCGAGT
CCGTTCGGCCCCGCCA
Downstream region at tRNA end position 
cttcgtcagt
Secondary structure (Cloverleaf model)
>ENV09000332	Asp	GTC
                   t      GCCA cttcgtcagt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T T G C C     A
      A A A        G      + | | | |     G
    G       G A C G       G A C G G     C
    G         | | |                 T T
    C       A T G C
      G T          A     ACGAT
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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