The detailed information of tRNA gene sequence


Sequence ID>ENV09000360
Genome IDABSN01057615
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 825
End posion on genome 736
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgaccttcct
tRNA gene sequence 
GGACAGGTGTCAGAGTGGTCTAATGAGCACGCTTGGAAAGCGTGTGTGGGTGTAAGCTCA
CCGAGGGTTCGAATCCCTCCCTGTCCGCCA
Downstream region at tRNA end position 
gttgggtcct
Secondary structure (Cloverleaf model)
>ENV09000360	Ser	GGA
                   t      GCCA gttgggtcct
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C T       G A G G G     C
    G         | | |                 T T
    T       A T G A
      C T A        G     TGTGGGTGTAAGCTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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