The detailed information of tRNA gene sequence


Sequence ID>ENV09000400
Genome IDABSN01064320
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 681
End posion on genome 586
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acccaagcgc
tRNA gene sequence 
GGCGGGGCGTCCCAGGCTGGTGCCGGGCCCGGTCTTCAAAACCGGTGAGGGGTGCTGAGA
GGCGCTCCTGGGGGGTTCGATTCCCCTGCCCCGCCGttt
Downstream region at tRNA end position 
ttccggtaga
Secondary structure (Cloverleaf model)
>ENV09000400	SeC	TCA
                   c      Gttt ttccggtaga
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G          T T
                    G     T C C C C     A
      C G G        T      + | | | |     G
    T       A C C C       G G G G G     C
    G         | | |                 T T
    G       C G G G
      T G C        C     TGAGGGGTGCTGAGAGGCGCTCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK