The detailed information of tRNA gene sequence


Sequence ID>ENV09000416
Genome IDABSN01065981
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 189
End posion on genome 265
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gtgcccgcgt
tRNA gene sequence 
CGGGGTGTGGCTCAGCTTGGTAGAGCGCTCGGTTCGGGACCGAGAGGTCGGCGGTTCAAA
TCCGCCCACCCCGACCA
Downstream region at tRNA end position 
gcgtcgcctc
Secondary structure (Cloverleaf model)
>ENV09000416	Pro	CGG
                   t      ACCA gcgtcgcctc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C C G C C     A
      C G A        G      | | | | |     A
    T       C T C G       G G C G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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