The detailed information of tRNA gene sequence


Sequence ID>ENV09000419
Genome IDABSN01066418
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 712
End posion on genome 801
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tattgcgggc
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGCCGAATGGGGCACCCTGCTAAGGTGTTGATGGTTTCGGCCAT
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttttgtctc
Secondary structure (Cloverleaf model)
>ENV09000419	Ser	GCT
                   c      GCCA tttttgtctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G A C C       G T G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGATGGTTTCGGCCATCC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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