The detailed information of tRNA gene sequence


Sequence ID>ENV09000473
Genome IDABSO01002363
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormate_C1
Species
Start position on genome 927
End posion on genome 852
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatttcgccc
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAGT
CCTGCCCCCGCAACCA
Downstream region at tRNA end position 
accgcatgat
Secondary structure (Cloverleaf model)
>ENV09000473	Met	CAT
                   c      ACCA accgcatgat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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