The detailed information of tRNA gene sequence


Sequence ID>ENV09000622
Genome IDABSP01003600
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 407
End posion on genome 332
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tgatttttgt
tRNA gene sequence 
GCCTGGGTAGCTCAATTGGTGGAGCATCAGATTGTGGATCTGAGGGTTGCGGGTTCGAAC
CCCGTCCCGGGTACCA
Downstream region at tRNA end position 
gtttagacga
Secondary structure (Cloverleaf model)
>ENV09000622	His	GTG
                   t      ACCA gtttagacga
                     G + T
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C
                     G - C          C A
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T G          A     GGGTT
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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