The detailed information of tRNA gene sequence


Sequence ID>ENV09000665
Genome IDABSP01011652
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 297
End posion on genome 222
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cccgctgtgg
tRNA gene sequence 
GGGACGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCAGGTTCGAAT
CCCGCACGTCCTACCA
Downstream region at tRNA end position 
agtacaattt
Secondary structure (Cloverleaf model)
>ENV09000665	Lys	TTT
                   g      ACCA agtacaattt
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A          T A
                    T     C G C C C     A
      T G A        A      | |   | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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