The detailed information of tRNA gene sequence


Sequence ID>ENV09000694
Genome IDABSP01016063
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 75
End posion on genome -1
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcacttcat
tRNA gene sequence 
GGGGTGTTAGGGGAGTCTGGTTGTCCCCGTTGGCCTGTCACGCCAAAGATCACGGGTTCA
AATCCCGTACATCCCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV09000694	Asp	GTC
                   t      NNnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C
                     T - A          T A
                    T     T G C C C     A
    C T G A        A      | | | | |     A
  T         G G G G       A C G G G     C
  G         | | | |                 T T
  G         C C C C
    T T G T        G     AGATC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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