The detailed information of tRNA gene sequence


Sequence ID>ENV09000728
Genome IDABSP01024265
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 724
End posion on genome 648
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccaagtttac
tRNA gene sequence 
AGGCGTGTAGCTCAGTTGGTTAGAGCATGCGCTTGATAAGCGCAGGGTCACTGGTTCAAC
TCCAGTCACGCCTACCA
Downstream region at tRNA end position 
cttgattttt
Secondary structure (Cloverleaf model)
>ENV09000728	Ile	GAT
                   c      ACCA cttgattttt
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T C
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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