The detailed information of tRNA gene sequence


Sequence ID>ENV09000792
Genome IDABSP01038704
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethane_C1
Species
Start position on genome 591
End posion on genome 515
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position
tttttctggc
tRNA gene sequence
GCGCCCTTAGCTCAGTCTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCCCAGGTTCAAA
TCCTGGAGGGCGTACCA
Downstream region at tRNA end position
cgcttccggt
Secondary structure (Cloverleaf model)
>ENV09000792	Lys	CTT
                   c      ACCA cgcttccggt
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G G T C C     A
      T G A        A      | | | | |     A
    C       C T C G       C C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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