The detailed information of tRNA gene sequence


Sequence ID>ENV09001035
Genome IDABSQ01020188
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 6
End posion on genome 95
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnncttgc
tRNA gene sequence 
GGAGGCGTGACAGAGTGGTTAATTGCGGCAGTCTTGAAAACCGTTGTCCCTTTACGGGGG
CCGTAGGTTCAAATCCTACCGCCTCCGCCA
Downstream region at tRNA end position 
atccagccga
Secondary structure (Cloverleaf model)
>ENV09001035	Ser	TGA
                   c      GCCA atccagccga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    G       G A C A       G T A G G     C
    G       + | |                   T T
    T       T T G C
      T A A        G     TGTCCCTTTACGGGGGCC
                    G + T
                    C - G
                    A   C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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