The detailed information of tRNA gene sequence


Sequence ID>ENV09001087
Genome IDABSQ01030300
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 320
End posion on genome 233
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position
ccttccatcc
tRNA gene sequence
GCCCGGGTGGTGAAATTGGTAGACACAAGAGACTTAAAATCTCTCGCCTCTCAAGGGCGT
GCCGGTTCGATTCCGGCCCCGGGCACCA
Downstream region at tRNA end position
agtaattcca
Secondary structure (Cloverleaf model)
>ENV09001087	Leu	TAA
                   c      ACCA agtaattcca
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCCTCTCAAGGGCGT
                    A - T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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