The detailed information of tRNA gene sequence


Sequence ID>ENV09001204
Genome IDABSQ01049193
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 6
End posion on genome 95
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnntggcg
tRNA gene sequence 
GGAAGGGTGGCTGAGTGGTTAAAGGCACCTGACTCGAAATCAGGAGTAGGGGCAACCCTA
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
attgattata
Secondary structure (Cloverleaf model)
>ENV09001204	Ser	CGA
                   g      GCCA attgattata
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T A A        A     AGTAGGGGCAACCCTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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