The detailed information of tRNA gene sequence


Sequence ID>ENV09001254
Genome IDABSQ01056976
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethenol_C1
Species
Start position on genome 407
End posion on genome 480
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
ttgcatccat
tRNA gene sequence 
GGTCAGATGGGTGAGTGGCTAACCGATGCTCTGCAAAAGCATCTACACCTGTTCAAATCA
GGTTCTGACCTCTA
Downstream region at tRNA end position 
ttagttaggt
Secondary structure (Cloverleaf model)
>ENV09001254	Pseudo	GCA
                   t      TCTA ttagttaggt
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     T G G A C     A
        G A        G      | | | | |     A
      T     G T G G       A C C T G     C
      G       | | |                 T T
      G     A A C C
        C T        G     CTAC
                    A - T
                    T - A
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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