The detailed information of tRNA gene sequence


Sequence ID>ENV09001287
Genome IDABSR01000513
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 3694
End posion on genome 3619
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaattcttag
tRNA gene sequence 
GTCCCCATCGTCTAGAGGCCTAGGACACCTCCCTTTCACGGAGGCGACCGGGGTTCGAAT
CCCCGTGGGGACGCCA
Downstream region at tRNA end position 
aaagttttca
Secondary structure (Cloverleaf model)
>ENV09001287	Glu	TTC
                   g      GCCA aaagttttca
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CGAC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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