The detailed information of tRNA gene sequence


Sequence ID>ENV09001411
Genome IDABSR01005747
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 9123
End posion on genome 9048
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position
cgaaatgaat
tRNA gene sequence
GGGGTGTTAGCTCAGCTGGTAGAGCAGCGGACTTTTAATCCGTTTGTCGTGGGTTCGATC
CCCGCACACCCTACCA
Downstream region at tRNA end position
agatatataa
Secondary structure (Cloverleaf model)
>ENV09001411	Lys	TTT
                   t      ACCA agatatataa
                     G + T
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A          C T
                    T     C G C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TTGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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