The detailed information of tRNA gene sequence


Sequence ID>ENV09001508
Genome IDABSR01020654
Search identical group
Phylum/ClassFreshwater sediment metagenome lwMethylamine_C1
Species
Start position on genome 554
End posion on genome 478
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cagcacgccg
tRNA gene sequence 
CGGGGTGTGGCCTAGTCCGGTAAGGCGCTTCGTTCGGGACGAAGAGATCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
aaaatcttgt
Secondary structure (Cloverleaf model)
>ENV09001508	Pro	CGG
                   g      ACCA aaaatcttgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     G
    C       T C C G       G G A G G     C
    C       | | | |                 T T
    G       A G G C
      G T A        G     AGATC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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