The detailed information of tRNA gene sequence


Sequence ID>ENV09001639
Genome IDACQI01000174
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1248
End posion on genome 1162
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tgtttgatat
tRNA gene sequence 
GCGGTGGTGGCGGAATTGGCAGACGCGCTAGATTCAGGTTCTAGTGGGCTTATGCCCGTG
GAGGTTCAAGTCCTCTCCACCGCACCA
Downstream region at tRNA end position 
ggttttgctt
Secondary structure (Cloverleaf model)
>ENV09001639	Leu	CAG
                   t      ACCA ggttttgctt
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGCTTATGCCCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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