The detailed information of tRNA gene sequence


Sequence ID>ENV09001647
Genome IDACQI01000313
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 791
End posion on genome 866
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcatcttttt
tRNA gene sequence 
GGCCCCATCGTCTAGTGGCCTAGGACGCCAGGTTCTCATCCTGGTAGCAGGGGTTCGACT
CCCCTTGGGGCCGCTA
Downstream region at tRNA end position 
aaaatatgtt
Secondary structure (Cloverleaf model)
>ENV09001647	Glu	CTC
                   t      GCTA aaaatatgtt
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAGC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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