The detailed information of tRNA gene sequence


Sequence ID>ENV09001653
Genome IDACQI01000740
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 2319
End posion on genome 2233
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cattcaaaat
tRNA gene sequence 
GCCAGTGTGATGGAATTGGTAGACATGACGGATTCAAAATCCGTTGCCTTTGCGGGCGTG
GCGGTTCGAGTCCGCCCACTGGTACCA
Downstream region at tRNA end position 
ttttgaataa
Secondary structure (Cloverleaf model)
>ENV09001653	Leu	CAA
                   t      ACCA ttttgaataa
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C C G C C     A
      T A A        G      | | | | |     G
    T       G G T A       G G C G G     C
    G         | | |                 T T
    G       A C A T
      T A G        G     TGCCTTTGCGGGCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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