The detailed information of tRNA gene sequence


Sequence ID>ENV09001659
Genome IDACQI01001356
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 513
End posion on genome 589
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgtaaagtgc
tRNA gene sequence 
GCGGTTGTAGCTCAGTTGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCAACCGCGCCA
Downstream region at tRNA end position 
cttaaccccc
Secondary structure (Cloverleaf model)
>ENV09001659	Asp	GTC
                   c      GCCA cttaaccccc
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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