The detailed information of tRNA gene sequence


Sequence ID>ENV09001663
Genome IDACQI01001496
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 7133
End posion on genome 7057
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacatactgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATTGGTTCAAA
TCCAGTCCCCGCTACCA
Downstream region at tRNA end position 
cattctaaaa
Secondary structure (Cloverleaf model)
>ENV09001663	Met	CAT
                   t      ACCA cattctaaaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G A C C     A
      C G A        G      | + | | |     A
    T       C G A G       A T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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