The detailed information of tRNA gene sequence


Sequence ID>ENV09001666
Genome IDACQI01001629
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 755
End posion on genome 679
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttcgggttt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGTCGGCCTGTCACGCCGAAGGTCGCGGGTTCGAG
TCCCGTCACTCTCGCCA
Downstream region at tRNA end position 
cccaaactta
Secondary structure (Cloverleaf model)
>ENV09001666	Asp	GTC
                   t      GCCA cccaaactta
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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