The detailed information of tRNA gene sequence


Sequence ID>ENV09001667
Genome IDACQI01001629
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 619
End posion on genome 543
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgctttttgc
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGTCGGCCTGTCACGCCGAAGGTCGCGGGTTCGAG
TCCCGTCACTCTCGCCA
Downstream region at tRNA end position 
ttgtcattga
Secondary structure (Cloverleaf model)
>ENV09001667	Asp	GTC
                   c      GCCA ttgtcattga
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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