The detailed information of tRNA gene sequence


Sequence ID>ENV09001669
Genome IDACQI01001666
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 792
End posion on genome 717
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaactattgt
tRNA gene sequence 
GTCCCGTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGACT
CCCCTACGGGACGCCA
Downstream region at tRNA end position 
ctatttgcgg
Secondary structure (Cloverleaf model)
>ENV09001669	Glu	TTC
                   t      GCCA ctatttgcgg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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