The detailed information of tRNA gene sequence


Sequence ID>ENV09001671
Genome IDACQI01001666
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 601
End posion on genome 514
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ctttatataa
tRNA gene sequence 
GCCCGGGTGGTGGAATTGGTAGACACAGGGGACTTAAAATCCCCCGGCTATTGCAGCTGT
GCCGGTTCAAGTCCGGCCCCGGGCACCA
Downstream region at tRNA end position 
ctaacataac
Secondary structure (Cloverleaf model)
>ENV09001671	Leu	TAA
                   a      ACCA ctaacataac
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    T       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGCTATTGCAGCTGT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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