The detailed information of tRNA gene sequence


Sequence ID>ENV09001672
Genome IDACQI01001666
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 494
End posion on genome 421
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caatagtttt
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCATGAGCCTGCAAAGCTCTGATCCCCGGTTCAAATCC
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
gaaactatta
Secondary structure (Cloverleaf model)
>ENV09001672	Cys	GCA
                   t      TCCA gaaactatta
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATC
                    T   T
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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