The detailed information of tRNA gene sequence


Sequence ID>ENV09001675
Genome IDACQI01001754
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 2263
End posion on genome 2350
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctaacatat
tRNA gene sequence 
AGAGAGGTGTCCGAGCGGTTGAAGGTGCAGACCTGGAACGTCTGTGTGGTTTACTCCACC
GAGGGTTCGAATCCCTTCCTCTCTGCCA
Downstream region at tRNA end position 
gttttttaaa
Secondary structure (Cloverleaf model)
>ENV09001675	Ser	GGA
                   t      GCCA gttttttaaa
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C T       G A G G G     C
    G         | |                   T T
    T       A G G T
      T G A        G     TGTGGTTTACTCCACC
                    C - G
                    A - T
                    G - C
                    A - T
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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