The detailed information of tRNA gene sequence


Sequence ID>ENV09001681
Genome IDACQI01002081
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 697
End posion on genome 623
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gtcacaaagt
tRNA gene sequence 
GGCCCGTTCGTCTATCGGTTAGGACGCCAGGTTTTCAACCTGGAAAGACGAGTTCGATTC
TCGTACGGGCTACCA
Downstream region at tRNA end position 
gtttttcatt
Secondary structure (Cloverleaf model)
>ENV09001681	Glu	TTC
                   t      ACCA gtttttcatt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T G C T C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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