The detailed information of tRNA gene sequence


Sequence ID>ENV09001684
Genome IDACQI01002148
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1145
End posion on genome 1070
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gcggaaattc
tRNA gene sequence 
GCCGAAATAGCACAACTGGTAGTGCAACTGATTTGTAATCAGTAGGTTGTAGGTTCAAGT
CCTATTTTCGGCACCA
Downstream region at tRNA end position 
tatcctaaat
Secondary structure (Cloverleaf model)
>ENV09001684	Thr	TGT
                   c      ACCA tatcctaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     A - T          T G
                    T     T A T C C     A
      C A A        A      + | | | |     A
    T       C A C G       G T A G G     C
    G       | | | |                 T T
    G       G T G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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