The detailed information of tRNA gene sequence


Sequence ID>ENV09001685
Genome IDACQI01002290
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1153
End posion on genome 1078
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aggcttttat
tRNA gene sequence 
GCCCCCGTAGCTCAGGGGATAGAGCAGCGGTTTCCTAAACCGCGTGTCGGAGGTTCGAGT
CCTTCCGGGGGCACCA
Downstream region at tRNA end position 
tgagtttttg
Secondary structure (Cloverleaf model)
>ENV09001685	Arg	CCT
                   t      ACCA tgagtttttg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T T C C     A
      G G A        A      | + | | |     G
    G       C T C G       G G A G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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