The detailed information of tRNA gene sequence


Sequence ID>ENV09001687
Genome IDACQI01002290
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 459
End posion on genome 368
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgctactt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAAAGCGTGTAGGCAGTAAAGCCTG
CCTCCAGGGTTCAAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ttgtgatcgt
Secondary structure (Cloverleaf model)
>ENV09001687	Ser	GGA
                   t      GCCA ttgtgatcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TAGGCAGTAAAGCCTGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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