The detailed information of tRNA gene sequence


Sequence ID>ENV09001694
Genome IDACQI01002789
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1298
End posion on genome 1372
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
agtgactaaa
tRNA gene sequence 
GCGGGAATAGCTCAGCGGTAGAGCACAACCTTGCCAAGGTTGGGGTCGCGAGTTCGATCC
TCGTTTCCCGCTCCA
Downstream region at tRNA end position 
atttggcgga
Secondary structure (Cloverleaf model)
>ENV09001694	Gly	GCC
                   a      TCCA atttggcgga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          C T
                    T     T G C T C     A
        G A        A      + | | | |     G
      C     C T C G       G C G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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