The detailed information of tRNA gene sequence


Sequence ID>ENV09001695
Genome IDACQI01002789
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1377
End posion on genome 1450
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gctccaattt
tRNA gene sequence 
GGCGGAATAGCAAAATGGCTATGCAGTGGATTGCAAATCCATCTATCTCGGTTCGACTCC
GGGTTCCGCCTCCA
Downstream region at tRNA end position 
ttttttttcg
Secondary structure (Cloverleaf model)
>ENV09001695	Cys	GCA
                   t      TCCA ttttttttcg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    T     G G G C C     A
        A A        A      | + | | |     G
      T     A A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C T        A     CTAT
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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