The detailed information of tRNA gene sequence


Sequence ID>ENV09001713
Genome IDACQI01003428
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 980
End posion on genome 1055
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcaaaggaat
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCACTGGTCTCCAAAACCAGAGGCTGCAGGTTCAAGA
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
aagttacagc
Secondary structure (Cloverleaf model)
>ENV09001713	Trp	CCA
                   t      GCCA aagttacagc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          A G
                    T     T G T C C     A
      T A A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGCT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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