The detailed information of tRNA gene sequence


Sequence ID>ENV09001716
Genome IDACQI01003520
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 41
End posion on genome 116
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtgcttaatt
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCGAGC
CCAGTATCACCCACCA
Downstream region at tRNA end position 
tggagcggta
Secondary structure (Cloverleaf model)
>ENV09001716	Val	TAC
                   t      ACCA tggagcggta
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          C G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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