The detailed information of tRNA gene sequence


Sequence ID>ENV09001721
Genome IDACQI01003615
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 4283
End posion on genome 4208
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
aacttaacat
tRNA gene sequence
GGGGGCGTAGCTCAGCTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGCGGTTCGAAT
CCGCTCGTCTCCACCA
Downstream region at tRNA end position
cagaaagttc
Secondary structure (Cloverleaf model)
>ENV09001721	Ala	TGC
                   t      ACCA cagaaagttc
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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