The detailed information of tRNA gene sequence


Sequence ID>ENV09001749
Genome IDACQI01004804
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 2141
End posion on genome 2066
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atctgtacta
tRNA gene sequence 
GGGCCGTTGGCGCAGTTGGTAGCGCGCCTCCGTGGCACGGAGGAGGTCATCGGTTCGAAT
CCGGTACGGTCCACTA
Downstream region at tRNA end position 
aattcaatat
Secondary structure (Cloverleaf model)
>ENV09001749	Ala	GGC
                   a      ACTA aattcaatat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G G C C     A
      T G A        G      | + | | |     G
    T       C G C G       A T C G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  G       C
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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